WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06B8.8.1 Sequence Name  C06B8.8.1
Length (nt)  287   Chromosome Location  V: 15512179-15512737
Chromosome . Primary Identifier  V Chromosome Location . Start  15512179
Chromosome Location . End  15512737 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06B8.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004452 rpl-38 C06B8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06B8.8 C06B8.8 213   V: 15512195-15512338

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.8.1 15512179 15512737 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209984   160   V: 15512179-15512338 Caenorhabditis elegans
Exon209988   127   V: 15512611-15512737 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.8.1 15512179 15512737 1

1 Sequence

Length
287

1 Sequence Ontology Term

Identifier Name Description
transcript