WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21A3.7b.1 Sequence Name  F21A3.7b.1
Length (nt)  1044   Chromosome Location  V: 15512855-15515296
Chromosome . Primary Identifier  V Chromosome Location . Start  15512855
Chromosome Location . End  15515296 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21A3.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008997 lgc-31 F21A3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21A3.7b F21A3.7b 1044   V: 15512855-15512960

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21A3.7b.1 15512855 15515296 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209990   106   V: 15512855-15512960 Caenorhabditis elegans
Exon209992   141   V: 15513008-15513148 Caenorhabditis elegans
Exon209994   149   V: 15513191-15513339 Caenorhabditis elegans
Exon209996   177   V: 15513465-15513641 Caenorhabditis elegans
Exon209998   46   V: 15513738-15513783 Caenorhabditis elegans
Exon210000   294   V: 15514663-15514956 Caenorhabditis elegans
Exon210002   85   V: 15515116-15515200 Caenorhabditis elegans
Exon210003   46   V: 15515251-15515296 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21A3.7b.1 15512855 15515296 -1

1 Sequence

Length
1044

1 Sequence Ontology Term

Identifier Name Description
transcript