WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21A3.7a.1 Sequence Name  F21A3.7a.1
Length (nt)  2133   Chromosome Location  V: 15512765-15522020
Chromosome . Primary Identifier  V Chromosome Location . Start  15512765
Chromosome Location . End  15522020 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21A3.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008997 lgc-31 F21A3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21A3.7a F21A3.7a 2028   V: 15512855-15512960

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21A3.7a.1 15512765 15522020 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210043   196   V: 15512765-15512960 Caenorhabditis elegans
Exon210045   141   V: 15513008-15513148 Caenorhabditis elegans
Exon210047   149   V: 15513191-15513339 Caenorhabditis elegans
Exon210049   177   V: 15513465-15513641 Caenorhabditis elegans
Exon210051   46   V: 15513738-15513783 Caenorhabditis elegans
Exon210053   294   V: 15514663-15514956 Caenorhabditis elegans
Exon210055   85   V: 15515116-15515200 Caenorhabditis elegans
Exon210058   236   V: 15515251-15515486 Caenorhabditis elegans
Exon210061   138   V: 15515631-15515768 Caenorhabditis elegans
Exon210062   110   V: 15516890-15516999 Caenorhabditis elegans
Exon210073   45   V: 15519553-15519597 Caenorhabditis elegans
Exon210074   82   V: 15519674-15519755 Caenorhabditis elegans
Exon210075   265   V: 15521114-15521378 Caenorhabditis elegans
Exon210076   169   V: 15521852-15522020 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21A3.7a.1 15512765 15522020 -1

1 Sequence

Length
2133

1 Sequence Ontology Term

Identifier Name Description
transcript