WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28F8.9a.1 Sequence Name  F28F8.9a.1
Length (nt)  702   Chromosome Location  V: 15577494-15578405
Chromosome . Primary Identifier  V Chromosome Location . Start  15577494
Chromosome Location . End  15578405 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28F8.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044188 F28F8.9 F28F8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28F8.9a F28F8.9a 534   V: 15577653-15577808

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28F8.9a.1 15577494 15578405 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210116   315   V: 15577494-15577808 Caenorhabditis elegans
Exon210119   122   V: 15577911-15578032 Caenorhabditis elegans
Exon210122   79   V: 15578079-15578157 Caenorhabditis elegans
Exon210125   186   V: 15578220-15578405 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28F8.9a.1 15577494 15578405 -1

1 Sequence

Length
702

1 Sequence Ontology Term

Identifier Name Description
transcript