WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55A1.5.1 Sequence Name  C55A1.5.1
Length (nt)  1086   Chromosome Location  V: 15644875-15646478
Chromosome . Primary Identifier  V Chromosome Location . Start  15644875
Chromosome Location . End  15646478 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55A1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006090 str-23 C55A1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55A1.5 C55A1.5 1086   V: 15644875-15645105

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55A1.5.1 15644875 15646478 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210240   231   V: 15644875-15645105 Caenorhabditis elegans
Exon210241   167   V: 15645161-15645327 Caenorhabditis elegans
Exon210242   135   V: 15645377-15645511 Caenorhabditis elegans
Exon210243   437   V: 15645876-15646312 Caenorhabditis elegans
Exon210244   116   V: 15646363-15646478 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55A1.5.1 15644875 15646478 1

1 Sequence

Length
1086

1 Sequence Ontology Term

Identifier Name Description
transcript