WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53E4.1b Sequence Name  F53E4.1b
Length (nt)  1263   Chromosome Location  V: 15652786-15652967
Chromosome . Primary Identifier  V Chromosome Location . Start  15652786
Chromosome Location . End  15652967
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53E4.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40962 F53E4.1, isoform b 47.5 420 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00001071
WBRNAi00048127
WBRNAi00032694
WBRNAi00015511

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53E4.1b 15652786 15652967 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009978 F53E4.1 F53E4.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53E4.1b 15652786 15652967 -1
CDS:F53E4.1b 15653176 15653356 -1
CDS:F53E4.1b 15654248 15654487 -1
CDS:F53E4.1b 15655181 15655273 -1
CDS:F53E4.1b 15656471 15656658 -1
CDS:F53E4.1b 15657389 15657613 -1
CDS:F53E4.1b 15657810 15657888 -1
CDS:F53E4.1b 15658987 15659061 -1

1 Sequence

Length
1263

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53E4.1b.1 F53E4.1b.1 1637   V: 15652430-15659079