WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6E2A.4.1 Sequence Name  Y6E2A.4.1
Length (nt)  2644   Chromosome Location  V: 15712207-15716779
Chromosome . Primary Identifier  V Chromosome Location . Start  15712207
Chromosome Location . End  15716779 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6E2A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012398 Y6E2A.4 Y6E2A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6E2A.4 Y6E2A.4 1599   V: 15712248-15712481

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y6E2A.4.1 15712207 15716779 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210363   275   V: 15712207-15712481 Caenorhabditis elegans
Exon210364   123   V: 15712542-15712664 Caenorhabditis elegans
Exon210366   246   V: 15713327-15713572 Caenorhabditis elegans
Exon210368   169   V: 15713616-15713784 Caenorhabditis elegans
Exon210370   168   V: 15714077-15714244 Caenorhabditis elegans
Exon210372   233   V: 15714630-15714862 Caenorhabditis elegans
Exon210374   117   V: 15714910-15715026 Caenorhabditis elegans
Exon210376   246   V: 15715075-15715320 Caenorhabditis elegans
Exon210378   67   V: 15715582-15715648 Caenorhabditis elegans
Exon210380   1000   V: 15715780-15716779 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y6E2A.4.1 15712207 15716779 -1

1 Sequence

Length
2644

1 Sequence Ontology Term

Identifier Name Description
transcript