WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6E2A.8.1 Sequence Name  Y6E2A.8.1
Length (nt)  1298   Chromosome Location  V: 15724810-15726710
Chromosome . Primary Identifier  V Chromosome Location . Start  15724810
Chromosome Location . End  15726710 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6E2A.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012401 irld-57 Y6E2A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6E2A.8 Y6E2A.8 1251   V: 15724849-15725570

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y6E2A.8.1 15724810 15726710 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210401   761   V: 15724810-15725570 Caenorhabditis elegans
Exon210402   92   V: 15725617-15725708 Caenorhabditis elegans
Exon210403   59   V: 15726031-15726089 Caenorhabditis elegans
Exon210404   218   V: 15726141-15726358 Caenorhabditis elegans
Exon210405   87   V: 15726495-15726581 Caenorhabditis elegans
Exon210406   81   V: 15726630-15726710 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y6E2A.8.1 15724810 15726710 -1

1 Sequence

Length
1298

1 Sequence Ontology Term

Identifier Name Description
transcript