WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y6E2A.9a Sequence Name  Y6E2A.9a
Length (nt)  990   Chromosome Location  V: 15726867-15726942
Chromosome . Primary Identifier  V Chromosome Location . Start  15726867
Chromosome Location . End  15726942
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6E2A.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16585 SFXN-1.3, isoform a 36.9 329 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00058109
WBRNAi00021350
WBRNAi00037751

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y6E2A.9a 15726867 15726942 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012402 sfxn-1.3 Y6E2A.9 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y6E2A.9a 15726867 15726942 1
CDS:Y6E2A.9a 15727049 15727269 1
CDS:Y6E2A.9a 15727542 15727849 1
CDS:Y6E2A.9a 15727895 15728022 1
CDS:Y6E2A.9a 15728075 15728331 1

1 Sequence

Length
990

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y6E2A.9a.1 Y6E2A.9a.1 1043   V: 15726841-15728358