WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014844 Gene Name  T23D5.5
Sequence Name  ? T23D5.5 Organism  Caenorhabditis elegans
Automated Description  Is affected by clk-1 based on microarray studies. Biotype  SO:0000336
Genetic Position  Length (nt)  ? 2640
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014844

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

87 Allele

Public Name
gk963271
gk964458
gk964459
gk964389
WBVar02124261
gk963695
gk963386
gk963387
WBVar02123701
WBVar02123133
WBVar02123298
WBVar02121283
tm10586
WBVar00091245
WBVar01591089
WBVar01591088
WBVar01591092
WBVar01591093
WBVar01591094
WBVar01591095
WBVar01591090
WBVar01591091
WBVar01591096
WBVar01591097
WBVar01591098
WBVar01591099
WBVar01591111
WBVar01591112
WBVar01591113
WBVar01591110

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00014844 15737020 15739659 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_15735821..15737019   1199 V: 15735821-15737019 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Up-regulated genes (fold change > 1.5) in two CoQ-deficient clk-1 mutant strains (e2519, qm30) compared to wild types N2. Fold-changes of intensities were calculated from the arithmetic mean of gene expression values between experimental and corresponding control group. Fold change >= 1.5 was used as cut-off. WBPaper00045774:clk-1_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00014844 15737020 15739659 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
2640

1 Sequence Ontology Term