WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T26E4.1.1 Sequence Name  T26E4.1.1
Length (nt)  1288   Chromosome Location  V: 15779679-15781247
Chromosome . Primary Identifier  V Chromosome Location . Start  15779679
Chromosome Location . End  15781247 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26E4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012043 irld-52 T26E4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T26E4.1 T26E4.1 1206   V: 15779693-15779804

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T26E4.1.1 15779679 15781247 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210581   126   V: 15779679-15779804 Caenorhabditis elegans
Exon210582   296   V: 15779865-15780160 Caenorhabditis elegans
Exon210583   129   V: 15780240-15780368 Caenorhabditis elegans
Exon210584   370   V: 15780413-15780782 Caenorhabditis elegans
Exon210585   213   V: 15780832-15781044 Caenorhabditis elegans
Exon210586   154   V: 15781094-15781247 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T26E4.1.1 15779679 15781247 1

1 Sequence

Length
1288

1 Sequence Ontology Term

Identifier Name Description
transcript