WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F54B8.8.1 Sequence Name  F54B8.8.1
Length (nt)  846   Chromosome Location  V: 15823898-15824966
Chromosome . Primary Identifier  V Chromosome Location . Start  15823898
Chromosome Location . End  15824966 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54B8.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010022 srbc-50 F54B8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54B8.8 F54B8.8 846   V: 15823898-15824110

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54B8.8.1 15823898 15824966 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210653   213   V: 15823898-15824110 Caenorhabditis elegans
Exon210654   458   V: 15824270-15824727 Caenorhabditis elegans
Exon210655   175   V: 15824792-15824966 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54B8.8.1 15823898 15824966 -1

1 Sequence

Length
846

1 Sequence Ontology Term

Identifier Name Description
transcript