WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06C12.6.1 Sequence Name  T06C12.6.1
Length (nt)  1367   Chromosome Location  V: 15874093-15876408
Chromosome . Primary Identifier  V Chromosome Location . Start  15874093
Chromosome Location . End  15876408 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06C12.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003692 nhr-102 T06C12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06C12.6 T06C12.6 1245   V: 15874214-15874461

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06C12.6.1 15874093 15876408 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210733   369   V: 15874093-15874461 Caenorhabditis elegans
Exon210734   119   V: 15874635-15874753 Caenorhabditis elegans
Exon210735   92   V: 15874798-15874889 Caenorhabditis elegans
Exon210736   96   V: 15874961-15875056 Caenorhabditis elegans
Exon210737   330   V: 15875107-15875436 Caenorhabditis elegans
Exon210738   133   V: 15875483-15875615 Caenorhabditis elegans
Exon210739   81   V: 15875838-15875918 Caenorhabditis elegans
Exon210740   147   V: 15876262-15876408 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06C12.6.1 15874093 15876408 -1

1 Sequence

Length
1367

1 Sequence Ontology Term

Identifier Name Description
transcript