WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06C12.8a.1 Sequence Name  T06C12.8a.1
Length (nt)  2069   Chromosome Location  V: 15881932-15884798
Chromosome . Primary Identifier  V Chromosome Location . Start  15881932
Chromosome Location . End  15884798 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06C12.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011515 oac-42 T06C12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06C12.8a T06C12.8a 1593   V: 15882586-15882631

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06C12.8a.1 15881932 15884798 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210748   305   V: 15881932-15882236 Caenorhabditis elegans
Exon210751   209   V: 15882423-15882631 Caenorhabditis elegans
Exon210752   115   V: 15882689-15882803 Caenorhabditis elegans
Exon210753   127   V: 15882848-15882974 Caenorhabditis elegans
Exon210754   293   V: 15883022-15883314 Caenorhabditis elegans
Exon210756   166   V: 15883457-15883622 Caenorhabditis elegans
Exon210758   224   V: 15883670-15883893 Caenorhabditis elegans
Exon210760   87   V: 15884004-15884090 Caenorhabditis elegans
Exon210762   139   V: 15884134-15884272 Caenorhabditis elegans
Exon210764   265   V: 15884314-15884578 Caenorhabditis elegans
Exon210767   139   V: 15884660-15884798 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06C12.8a.1 15881932 15884798 -1

1 Sequence

Length
2069

1 Sequence Ontology Term

Identifier Name Description
transcript