WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06C12.7.1 Sequence Name  T06C12.7.1
Length (nt)  1412   Chromosome Location  V: 15876732-15879608
Chromosome . Primary Identifier  V Chromosome Location . Start  15876732
Chromosome Location . End  15879608 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06C12.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003674 nhr-84 T06C12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06C12.7 T06C12.7 1251   V: 15876852-15877096

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06C12.7.1 15876732 15879608 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210795   365   V: 15876732-15877096 Caenorhabditis elegans
Exon210796   119   V: 15877804-15877922 Caenorhabditis elegans
Exon210797   416   V: 15877969-15878384 Caenorhabditis elegans
Exon210798   176   V: 15878739-15878914 Caenorhabditis elegans
Exon210799   59   V: 15879178-15879236 Caenorhabditis elegans
Exon210800   78   V: 15879286-15879363 Caenorhabditis elegans
Exon210801   199   V: 15879410-15879608 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06C12.7.1 15876732 15879608 -1

1 Sequence

Length
1412

1 Sequence Ontology Term

Identifier Name Description
transcript