WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06C6.9.1 Sequence Name  C06C6.9.1
Length (nt)  374   Chromosome Location  V: 15996171-15996755
Chromosome . Primary Identifier  V Chromosome Location . Start  15996171
Chromosome Location . End  15996755 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06C6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007383 C06C6.9 C06C6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06C6.9 C06C6.9 321   V: 15996214-15996277

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06C6.9.1 15996171 15996755 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211018   107   V: 15996171-15996277 Caenorhabditis elegans
Exon211019   60   V: 15996325-15996384 Caenorhabditis elegans
Exon211020   80   V: 15996429-15996508 Caenorhabditis elegans
Exon211021   87   V: 15996556-15996642 Caenorhabditis elegans
Exon211022   40   V: 15996716-15996755 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06C6.9.1 15996171 15996755 -1

1 Sequence

Length
374

1 Sequence Ontology Term

Identifier Name Description
transcript