WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14H3.2.2 Sequence Name  F14H3.2.2
Length (nt)  1470   Chromosome Location  V: 16049731-16051717
Chromosome . Primary Identifier  V Chromosome Location . Start  16049731
Chromosome Location . End  16051717 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14H3.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008821 best-12 F14H3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14H3.2 F14H3.2 1305   V: 16049733-16049792

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14H3.2.2 16049731 16051717 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211271   62   V: 16049731-16049792 Caenorhabditis elegans
Exon211274   122   V: 16049841-16049962 Caenorhabditis elegans
Exon211276   138   V: 16050009-16050146 Caenorhabditis elegans
Exon211278   206   V: 16050219-16050424 Caenorhabditis elegans
Exon211280   116   V: 16050467-16050582 Caenorhabditis elegans
Exon211282   195   V: 16050689-16050883 Caenorhabditis elegans
Exon211284   147   V: 16050983-16051129 Caenorhabditis elegans
Exon211286   152   V: 16051189-16051340 Caenorhabditis elegans
Exon211288   332   V: 16051386-16051717 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14H3.2.2 16049731 16051717 1

1 Sequence

Length
1470

1 Sequence Ontology Term

Identifier Name Description
transcript