WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22B8.1.1 Sequence Name  F22B8.1.1
Length (nt)  1140   Chromosome Location  V: 16075659-16077308
Chromosome . Primary Identifier  V Chromosome Location . Start  16075659
Chromosome Location . End  16077308 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22B8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005616 srj-29 F22B8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22B8.1 F22B8.1 1140   V: 16075659-16075946

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22B8.1.1 16075659 16077308 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211291   288   V: 16075659-16075946 Caenorhabditis elegans
Exon211292   60   V: 16075987-16076046 Caenorhabditis elegans
Exon211293   107   V: 16076386-16076492 Caenorhabditis elegans
Exon211294   88   V: 16076539-16076626 Caenorhabditis elegans
Exon211295   117   V: 16076672-16076788 Caenorhabditis elegans
Exon211296   480   V: 16076829-16077308 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22B8.1.1 16075659 16077308 1

1 Sequence

Length
1140

1 Sequence Ontology Term

Identifier Name Description
transcript