WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10A3.4.2 Sequence Name  F10A3.4.2
Length (nt)  1837   Chromosome Location  V: 16149105-16151899
Chromosome . Primary Identifier  V Chromosome Location . Start  16149105
Chromosome Location . End  16151899 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10A3.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008634 F10A3.4 F10A3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10A3.4 F10A3.4 1710   V: 16149242-16149302

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10A3.4.2 16149105 16151899 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211429   36   V: 16149105-16149140 Caenorhabditis elegans
Exon211430   63   V: 16149240-16149302 Caenorhabditis elegans
Exon211433   104   V: 16149706-16149809 Caenorhabditis elegans
Exon211435   104   V: 16149853-16149956 Caenorhabditis elegans
Exon211437   125   V: 16150002-16150126 Caenorhabditis elegans
Exon211439   107   V: 16150172-16150278 Caenorhabditis elegans
Exon211441   452   V: 16150325-16150776 Caenorhabditis elegans
Exon211443   324   V: 16150958-16151281 Caenorhabditis elegans
Exon211445   142   V: 16151334-16151475 Caenorhabditis elegans
Exon211447   380   V: 16151520-16151899 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10A3.4.2 16149105 16151899 1

1 Sequence

Length
1837

1 Sequence Ontology Term

Identifier Name Description
transcript