WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K05D4.6b Sequence Name  K05D4.6b
Length (nt)  648   Chromosome Location  V: 16186185-16186322
Chromosome . Primary Identifier  V Chromosome Location . Start  16186185
Chromosome Location . End  16186322
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05D4.6b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46089 SRH-277, isoform b 25.0 215 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00049984
WBRNAi00016625
WBRNAi00033986

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K05D4.6b 16186185 16186322 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005482 srh-277 K05D4.6 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:K05D4.6b 16186185 16186322 1
CDS:K05D4.6b 16186367 16186609 1
CDS:K05D4.6b 16186654 16186920 1

1 Sequence

Length
648

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K05D4.6b.1 K05D4.6b.1 3647   V: 16183218-16186952
Transcript:K05D4.6b.2 K05D4.6b.2 1021   V: 16183276-16186920