WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F11A5.5a Sequence Name  F11A5.5a
Length (nt)  1092   Chromosome Location  V: 16198450-16198573
Chromosome . Primary Identifier  V Chromosome Location . Start  16198450
Chromosome Location . End  16198573
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11A5.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE15783 F11A5.5, isoform a 42.4 363 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00044353
WBRNAi00013109
WBRNAi00030810

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F11A5.5a 16198450 16198573 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008673 F11A5.5 F11A5.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F11A5.5a 16198450 16198573 1
CDS:F11A5.5a 16198794 16198833 1
CDS:F11A5.5a 16198888 16199131 1
CDS:F11A5.5a 16199726 16199842 1
CDS:F11A5.5a 16199897 16200000 1
CDS:F11A5.5a 16200175 16200272 1
CDS:F11A5.5a 16200332 16200499 1
CDS:F11A5.5a 16200763 16200857 1
CDS:F11A5.5a 16200928 16201029 1

1 Sequence

Length
1092

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F11A5.5a.1 F11A5.5a.1 1251   V: 16198316-16201054