WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11A5.7.1 Sequence Name  F11A5.7.1
Length (nt)  1083   Chromosome Location  V: 16205188-16206818
Chromosome . Primary Identifier  V Chromosome Location . Start  16205188
Chromosome Location . End  16206818 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11A5.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008675 irld-26 F11A5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11A5.7 F11A5.7 1083   V: 16205188-16205278

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11A5.7.1 16205188 16206818 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211562   91   V: 16205188-16205278 Caenorhabditis elegans
Exon211563   74   V: 16205331-16205404 Caenorhabditis elegans
Exon211564   115   V: 16205450-16205564 Caenorhabditis elegans
Exon211565   137   V: 16205608-16205744 Caenorhabditis elegans
Exon211566   337   V: 16205792-16206128 Caenorhabditis elegans
Exon211567   68   V: 16206396-16206463 Caenorhabditis elegans
Exon211568   145   V: 16206510-16206654 Caenorhabditis elegans
Exon211569   116   V: 16206703-16206818 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11A5.7.1 16205188 16206818 1

1 Sequence

Length
1083

1 Sequence Ontology Term

Identifier Name Description
transcript