WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21H7.2.2 Sequence Name  F21H7.2.2
Length (nt)  1940   Chromosome Location  V: 16227121-16229996
Chromosome . Primary Identifier  V Chromosome Location . Start  16227121
Chromosome Location . End  16229996 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21H7.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009028 F21H7.2 F21H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21H7.2 F21H7.2 1527   V: 16227154-16227271

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21H7.2.2 16227121 16229996 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211610   151   V: 16227121-16227271 Caenorhabditis elegans
Exon211613   122   V: 16227319-16227440 Caenorhabditis elegans
Exon211615   79   V: 16227489-16227567 Caenorhabditis elegans
Exon211617   249   V: 16227618-16227866 Caenorhabditis elegans
Exon211619   103   V: 16227914-16228016 Caenorhabditis elegans
Exon211621   163   V: 16228162-16228324 Caenorhabditis elegans
Exon211623   57   V: 16228371-16228427 Caenorhabditis elegans
Exon211625   132   V: 16228475-16228606 Caenorhabditis elegans
Exon211627   147   V: 16228654-16228800 Caenorhabditis elegans
Exon211629   96   V: 16228862-16228957 Caenorhabditis elegans
Exon211631   238   V: 16229259-16229496 Caenorhabditis elegans
Exon211632   49   V: 16229547-16229595 Caenorhabditis elegans
Exon211634   354   V: 16229643-16229996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21H7.2.2 16227121 16229996 -1

1 Sequence

Length
1940

1 Sequence Ontology Term

Identifier Name Description
transcript