WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21H7.2.1 Sequence Name  F21H7.2.1
Length (nt)  1659   Chromosome Location  V: 16227127-16229674
Chromosome . Primary Identifier  V Chromosome Location . Start  16227127
Chromosome Location . End  16229674 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21H7.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009028 F21H7.2 F21H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21H7.2 F21H7.2 1527   V: 16227154-16227271

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21H7.2.1 16227127 16229674 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211611   145   V: 16227127-16227271 Caenorhabditis elegans
Exon211612   122   V: 16227319-16227440 Caenorhabditis elegans
Exon211614   79   V: 16227489-16227567 Caenorhabditis elegans
Exon211616   249   V: 16227618-16227866 Caenorhabditis elegans
Exon211618   103   V: 16227914-16228016 Caenorhabditis elegans
Exon211620   163   V: 16228162-16228324 Caenorhabditis elegans
Exon211622   57   V: 16228371-16228427 Caenorhabditis elegans
Exon211624   132   V: 16228475-16228606 Caenorhabditis elegans
Exon211626   147   V: 16228654-16228800 Caenorhabditis elegans
Exon211628   96   V: 16228862-16228957 Caenorhabditis elegans
Exon211630   238   V: 16229259-16229496 Caenorhabditis elegans
Exon211633   128   V: 16229547-16229674 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21H7.2.1 16227127 16229674 -1

1 Sequence

Length
1659

1 Sequence Ontology Term

Identifier Name Description
transcript