WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21H7.9.1 Sequence Name  F21H7.9.1
Length (nt)  3327   Chromosome Location  V: 16248583-16253787
Chromosome . Primary Identifier  V Chromosome Location . Start  16248583
Chromosome Location . End  16253787 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21H7.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001545 gcy-20 F21H7.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21H7.9 F21H7.9 3327   V: 16248583-16248878

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21H7.9.1 16248583 16253787 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211662   296   V: 16248583-16248878 Caenorhabditis elegans
Exon211664   99   V: 16248940-16249038 Caenorhabditis elegans
Exon211665   175   V: 16249162-16249336 Caenorhabditis elegans
Exon211666   193   V: 16249380-16249572 Caenorhabditis elegans
Exon211667   236   V: 16249994-16250229 Caenorhabditis elegans
Exon211668   826   V: 16250274-16251099 Caenorhabditis elegans
Exon211669   194   V: 16251544-16251737 Caenorhabditis elegans
Exon211670   270   V: 16251786-16252055 Caenorhabditis elegans
Exon211671   123   V: 16252139-16252261 Caenorhabditis elegans
Exon211672   122   V: 16252343-16252464 Caenorhabditis elegans
Exon211673   126   V: 16252514-16252639 Caenorhabditis elegans
Exon211674   227   V: 16252681-16252907 Caenorhabditis elegans
Exon211675   243   V: 16253007-16253249 Caenorhabditis elegans
Exon211676   197   V: 16253591-16253787 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21H7.9.1 16248583 16253787 -1

1 Sequence

Length
3327

1 Sequence Ontology Term

Identifier Name Description
transcript