WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T13F3.2a Sequence Name  T13F3.2a
Length (nt)  1176   Chromosome Location  V: 16258486-16258619
Chromosome . Primary Identifier  V Chromosome Location . Start  16258486
Chromosome Location . End  16258619
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13F3.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41022 NHR-218, isoform a 46.1 391 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00053279
WBRNAi00018684
WBRNAi00107218

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T13F3.2a 16258486 16258619 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011750 nhr-218 T13F3.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T13F3.2a 16258486 16258619 1
CDS:T13F3.2a 16258669 16258802 1
CDS:T13F3.2a 16259234 16259397 1
CDS:T13F3.2a 16259442 16259531 1
CDS:T13F3.2a 16259587 16259799 1
CDS:T13F3.2a 16259849 16260065 1
CDS:T13F3.2a 16260447 16260670 1

1 Sequence

Length
1176

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T13F3.2a.1 T13F3.2a.1 1237   V: 16258442-16260687