WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T13F3.3 Sequence Name  T13F3.3
Length (nt)  1068   Chromosome Location  V: 16262295-16262407
Chromosome . Primary Identifier  V Chromosome Location . Start  16262295
Chromosome Location . End  16262407
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13F3.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35617 NHR-127 41.5 355 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00053280
WBRNAi00018685
WBRNAi00035546
WBRNAi00088717
WBRNAi00088610

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T13F3.3 16262295 16262407 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003717 nhr-127 T13F3.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T13F3.3 16262295 16262407 1
CDS:T13F3.3 16262506 16262639 1
CDS:T13F3.3 16262818 16262945 1
CDS:T13F3.3 16262994 16263089 1
CDS:T13F3.3 16263140 16263352 1
CDS:T13F3.3 16263458 16263674 1
CDS:T13F3.3 16263725 16263891 1

1 Sequence

Length
1068

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T13F3.3.1 T13F3.3.1 1859   V: 16259984-16263953
Transcript:T13F3.3.2 T13F3.3.2 1778   V: 16261647-16263953