WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C31A11.5.1 Sequence Name  C31A11.5.1
Length (nt)  2218   Chromosome Location  V: 16302717-16306159
Chromosome . Primary Identifier  V Chromosome Location . Start  16302717
Chromosome Location . End  16306159 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C31A11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007833 oac-6 C31A11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C31A11.5 C31A11.5 2118   V: 16302769-16302837

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C31A11.5.1 16302717 16306159 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211801   121   V: 16302717-16302837 Caenorhabditis elegans
Exon211802   187   V: 16302892-16303078 Caenorhabditis elegans
Exon211803   143   V: 16303133-16303275 Caenorhabditis elegans
Exon211804   460   V: 16303537-16303996 Caenorhabditis elegans
Exon211805   282   V: 16304059-16304340 Caenorhabditis elegans
Exon211806   280   V: 16304390-16304669 Caenorhabditis elegans
Exon211807   219   V: 16304718-16304936 Caenorhabditis elegans
Exon211808   95   V: 16305491-16305585 Caenorhabditis elegans
Exon211809   146   V: 16305630-16305775 Caenorhabditis elegans
Exon211810   86   V: 16305829-16305914 Caenorhabditis elegans
Exon211811   199   V: 16305961-16306159 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C31A11.5.1 16302717 16306159 1

1 Sequence

Length
2218

1 Sequence Ontology Term

Identifier Name Description
transcript