WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57G8.1.1 Sequence Name  F57G8.1.1
Length (nt)  1030   Chromosome Location  V: 16317544-16318816
Chromosome . Primary Identifier  V Chromosome Location . Start  16317544
Chromosome Location . End  16318816 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57G8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005395 srh-180 F57G8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57G8.1 F57G8.1 996   V: 16317567-16317885

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57G8.1.1 16317544 16318816 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211833   342   V: 16317544-16317885 Caenorhabditis elegans
Exon211834   194   V: 16317937-16318130 Caenorhabditis elegans
Exon211835   304   V: 16318275-16318578 Caenorhabditis elegans
Exon211836   190   V: 16318627-16318816 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57G8.1.1 16317544 16318816 1

1 Sequence

Length
1030

1 Sequence Ontology Term

Identifier Name Description
transcript