WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08G11.1.1 Sequence Name  W08G11.1.1
Length (nt)  1245   Chromosome Location  V: 16347058-16349915
Chromosome . Primary Identifier  V Chromosome Location . Start  16347058
Chromosome Location . End  16349915 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08G11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012346 W08G11.1 W08G11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08G11.1 W08G11.1 1146   V: 16347075-16347172

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W08G11.1.1 16347058 16349915 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211896   115   V: 16347058-16347172 Caenorhabditis elegans
Exon211897   154   V: 16347435-16347588 Caenorhabditis elegans
Exon211898   204   V: 16347637-16347840 Caenorhabditis elegans
Exon211899   121   V: 16348006-16348126 Caenorhabditis elegans
Exon211900   102   V: 16348169-16348270 Caenorhabditis elegans
Exon211901   109   V: 16348316-16348424 Caenorhabditis elegans
Exon211902   137   V: 16348657-16348793 Caenorhabditis elegans
Exon211903   303   V: 16349613-16349915 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W08G11.1.1 16347058 16349915 1

1 Sequence

Length
1245

1 Sequence Ontology Term

Identifier Name Description
transcript