WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08G11.3c.1 Sequence Name  W08G11.3c.1
Length (nt)  1929   Chromosome Location  V: 16367681-16372114
Chromosome . Primary Identifier  V Chromosome Location . Start  16367681
Chromosome Location . End  16372114 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08G11.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012347 W08G11.3 W08G11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08G11.3c W08G11.3c 1539   V: 16367709-16367774

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W08G11.3c.1 16367681 16372114 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211914   94   V: 16367681-16367774 Caenorhabditis elegans
Exon211921   92   V: 16368387-16368478 Caenorhabditis elegans
Exon211925   174   V: 16368650-16368823 Caenorhabditis elegans
Exon211929   97   V: 16369604-16369700 Caenorhabditis elegans
Exon211933   84   V: 16369859-16369942 Caenorhabditis elegans
Exon211937   128   V: 16369995-16370122 Caenorhabditis elegans
Exon211942   90   V: 16370407-16370496 Caenorhabditis elegans
Exon211946   217   V: 16370554-16370770 Caenorhabditis elegans
Exon211947   388   V: 16370837-16371224 Caenorhabditis elegans
Exon211953   565   V: 16371550-16372114 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W08G11.3c.1 16367681 16372114 1

1 Sequence

Length
1929

1 Sequence Ontology Term

Identifier Name Description
transcript