WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08G11.3a.1 Sequence Name  W08G11.3a.1
Length (nt)  1934   Chromosome Location  V: 16367681-16372125
Chromosome . Primary Identifier  V Chromosome Location . Start  16367681
Chromosome Location . End  16372125 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08G11.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012347 W08G11.3 W08G11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08G11.3a W08G11.3a 1533   V: 16367709-16367774

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W08G11.3a.1 16367681 16372125 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211915   94   V: 16367681-16367774 Caenorhabditis elegans
Exon211918   92   V: 16368387-16368478 Caenorhabditis elegans
Exon211922   174   V: 16368650-16368823 Caenorhabditis elegans
Exon211926   97   V: 16369604-16369700 Caenorhabditis elegans
Exon211930   84   V: 16369859-16369942 Caenorhabditis elegans
Exon211934   128   V: 16369995-16370122 Caenorhabditis elegans
Exon211939   90   V: 16370407-16370496 Caenorhabditis elegans
Exon211943   217   V: 16370554-16370770 Caenorhabditis elegans
Exon211948   382   V: 16370843-16371224 Caenorhabditis elegans
Exon211954   576   V: 16371550-16372125 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W08G11.3a.1 16367681 16372125 1

1 Sequence

Length
1934

1 Sequence Ontology Term

Identifier Name Description
transcript