WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08G11.3a.2 Sequence Name  W08G11.3a.2
Length (nt)  1913   Chromosome Location  V: 16367691-16372114
Chromosome . Primary Identifier  V Chromosome Location . Start  16367691
Chromosome Location . End  16372114 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08G11.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012347 W08G11.3 W08G11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08G11.3a W08G11.3a 1533   V: 16367709-16367774

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W08G11.3a.2 16367691 16372114 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211916   84   V: 16367691-16367774 Caenorhabditis elegans
Exon211919   92   V: 16368387-16368478 Caenorhabditis elegans
Exon211923   174   V: 16368650-16368823 Caenorhabditis elegans
Exon211927   97   V: 16369604-16369700 Caenorhabditis elegans
Exon211931   84   V: 16369859-16369942 Caenorhabditis elegans
Exon211935   128   V: 16369995-16370122 Caenorhabditis elegans
Exon211940   90   V: 16370407-16370496 Caenorhabditis elegans
Exon211944   217   V: 16370554-16370770 Caenorhabditis elegans
Exon211949   382   V: 16370843-16371224 Caenorhabditis elegans
Exon211952   565   V: 16371550-16372114 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W08G11.3a.2 16367691 16372114 1

1 Sequence

Length
1913

1 Sequence Ontology Term

Identifier Name Description
transcript