WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08G11.5.1 Sequence Name  W08G11.5.1
Length (nt)  918   Chromosome Location  V: 16344375-16346506
Chromosome . Primary Identifier  V Chromosome Location . Start  16344375
Chromosome Location . End  16346506 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08G11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012349 W08G11.5 W08G11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08G11.5 W08G11.5 918   V: 16344375-16344662

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W08G11.5.1 16344375 16346506 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211944   288   V: 16344375-16344662 Caenorhabditis elegans
Exon211945   142   V: 16345106-16345247 Caenorhabditis elegans
Exon211946   135   V: 16345301-16345435 Caenorhabditis elegans
Exon211947   79   V: 16345480-16345558 Caenorhabditis elegans
Exon211948   88   V: 16346192-16346279 Caenorhabditis elegans
Exon211949   186   V: 16346321-16346506 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W08G11.5.1 16344375 16346506 -1

1 Sequence

Length
918

1 Sequence Ontology Term

Identifier Name Description
transcript