WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13A7.7.1 Sequence Name  F13A7.7.1
Length (nt)  1222   Chromosome Location  V: 16382076-16383829
Chromosome . Primary Identifier  V Chromosome Location . Start  16382076
Chromosome Location . End  16383829 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13A7.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008725 F13A7.7 F13A7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13A7.7 F13A7.7 1077   V: 16382167-16382400

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13A7.7.1 16382076 16383829 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211970   325   V: 16382076-16382400 Caenorhabditis elegans
Exon211971   423   V: 16382451-16382873 Caenorhabditis elegans
Exon211972   73   V: 16383208-16383280 Caenorhabditis elegans
Exon211973   95   V: 16383327-16383421 Caenorhabditis elegans
Exon211974   114   V: 16383471-16383584 Caenorhabditis elegans
Exon211975   192   V: 16383638-16383829 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13A7.7.1 16382076 16383829 -1

1 Sequence

Length
1222

1 Sequence Ontology Term

Identifier Name Description
transcript