WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13A7.8.1 Sequence Name  F13A7.8.1
Length (nt)  978   Chromosome Location  V: 16386662-16388368
Chromosome . Primary Identifier  V Chromosome Location . Start  16386662
Chromosome Location . End  16388368 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13A7.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005577 sri-65 F13A7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13A7.8 F13A7.8 978   V: 16386662-16386710

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13A7.8.1 16386662 16388368 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211981   49   V: 16386662-16386710 Caenorhabditis elegans
Exon211982   425   V: 16386756-16387180 Caenorhabditis elegans
Exon211983   219   V: 16387774-16387992 Caenorhabditis elegans
Exon211984   129   V: 16388041-16388169 Caenorhabditis elegans
Exon211985   156   V: 16388213-16388368 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13A7.8.1 16386662 16388368 -1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
transcript