WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26D2.12a.1 Sequence Name  F26D2.12a.1
Length (nt)  830   Chromosome Location  V: 16431928-16433571
Chromosome . Primary Identifier  V Chromosome Location . Start  16431928
Chromosome Location . End  16433571 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26D2.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009150 clec-234 F26D2.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26D2.12a F26D2.12a 726   V: 16432009-16432060

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26D2.12a.1 16431928 16433571 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212090   133   V: 16431928-16432060 Caenorhabditis elegans
Exon212093   48   V: 16432109-16432156 Caenorhabditis elegans
Exon212096   199   V: 16432212-16432410 Caenorhabditis elegans
Exon212099   106   V: 16432528-16432633 Caenorhabditis elegans
Exon212102   59   V: 16432690-16432748 Caenorhabditis elegans
Exon212105   75   V: 16432795-16432869 Caenorhabditis elegans
Exon212109   36   V: 16433207-16433242 Caenorhabditis elegans
Exon212110   66   V: 16433346-16433411 Caenorhabditis elegans
Exon212113   108   V: 16433464-16433571 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26D2.12a.1 16431928 16433571 -1

1 Sequence

Length
830

1 Sequence Ontology Term

Identifier Name Description
transcript