WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08G3.13.1 Sequence Name  T08G3.13.1
Length (nt)  651   Chromosome Location  V: 16448035-16449374
Chromosome . Primary Identifier  V Chromosome Location . Start  16448035
Chromosome Location . End  16449374 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08G3.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011621 T08G3.13 T08G3.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08G3.13 T08G3.13 534   V: 16448122-16448229

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08G3.13.1 16448035 16449374 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212141   195   V: 16448035-16448229 Caenorhabditis elegans
Exon212142   219   V: 16448707-16448925 Caenorhabditis elegans
Exon212143   237   V: 16449138-16449374 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08G3.13.1 16448035 16449374 1

1 Sequence

Length
651

1 Sequence Ontology Term

Identifier Name Description
transcript