WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08G3.2.1 Sequence Name  T08G3.2.1
Length (nt)  1032   Chromosome Location  V: 16453393-16455165
Chromosome . Primary Identifier  V Chromosome Location . Start  16453393
Chromosome Location . End  16455165 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08G3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006082 str-14 T08G3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08G3.2 T08G3.2 1032   V: 16453393-16453478

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08G3.2.1 16453393 16455165 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212146   86   V: 16453393-16453478 Caenorhabditis elegans
Exon212147   178   V: 16453519-16453696 Caenorhabditis elegans
Exon212148   207   V: 16453742-16453948 Caenorhabditis elegans
Exon212149   369   V: 16454565-16454933 Caenorhabditis elegans
Exon212150   192   V: 16454974-16455165 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08G3.2.1 16453393 16455165 -1

1 Sequence

Length
1032

1 Sequence Ontology Term

Identifier Name Description
transcript