WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08G3.1.1 Sequence Name  T08G3.1.1
Length (nt)  1023   Chromosome Location  V: 16457269-16458814
Chromosome . Primary Identifier  V Chromosome Location . Start  16457269
Chromosome Location . End  16458814 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08G3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006083 str-15 T08G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08G3.1 T08G3.1 1023   V: 16457269-16457339

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08G3.1.1 16457269 16458814 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212151   71   V: 16457269-16457339 Caenorhabditis elegans
Exon212152   178   V: 16457380-16457557 Caenorhabditis elegans
Exon212153   207   V: 16457611-16457817 Caenorhabditis elegans
Exon212154   369   V: 16458212-16458580 Caenorhabditis elegans
Exon212155   198   V: 16458617-16458814 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08G3.1.1 16457269 16458814 -1

1 Sequence

Length
1023

1 Sequence Ontology Term

Identifier Name Description
transcript