WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08G3.3.1 Sequence Name  T08G3.3.1
Length (nt)  1043   Chromosome Location  V: 16459336-16460966
Chromosome . Primary Identifier  V Chromosome Location . Start  16459336
Chromosome Location . End  16460966 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08G3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005359 srh-142 T08G3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08G3.3 T08G3.3 990   V: 16459388-16460055

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08G3.3.1 16459336 16460966 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212176   720   V: 16459336-16460055 Caenorhabditis elegans
Exon212177   146   V: 16460590-16460735 Caenorhabditis elegans
Exon212178   177   V: 16460790-16460966 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08G3.3.1 16459336 16460966 -1

1 Sequence

Length
1043

1 Sequence Ontology Term

Identifier Name Description
transcript