WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08G3.12.1 Sequence Name  T08G3.12.1
Length (nt)  981   Chromosome Location  V: 16469367-16471016
Chromosome . Primary Identifier  V Chromosome Location . Start  16469367
Chromosome Location . End  16471016 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08G3.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005355 srh-138 T08G3.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08G3.12 T08G3.12 981   V: 16469367-16470028

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08G3.12.1 16469367 16471016 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212227   662   V: 16469367-16470028 Caenorhabditis elegans
Exon212228   146   V: 16470653-16470798 Caenorhabditis elegans
Exon212229   173   V: 16470844-16471016 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08G3.12.1 16469367 16471016 -1

1 Sequence

Length
981

1 Sequence Ontology Term

Identifier Name Description
transcript