WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D3.5.2 Sequence Name  F36D3.5.2
Length (nt)  3693   Chromosome Location  V: 16510362-16515090
Chromosome . Primary Identifier  V Chromosome Location . Start  16510362
Chromosome Location . End  16515090 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D3.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009471 F36D3.5 F36D3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D3.5 F36D3.5 3648   V: 16510377-16510520

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36D3.5.2 16510362 16515090 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212254   159   V: 16510362-16510520 Caenorhabditis elegans
Exon212257   140   V: 16510570-16510709 Caenorhabditis elegans
Exon212259   316   V: 16510760-16511075 Caenorhabditis elegans
Exon212261   101   V: 16511125-16511225 Caenorhabditis elegans
Exon212263   225   V: 16511272-16511496 Caenorhabditis elegans
Exon212265   115   V: 16511542-16511656 Caenorhabditis elegans
Exon212267   377   V: 16511704-16512080 Caenorhabditis elegans
Exon212269   412   V: 16512127-16512538 Caenorhabditis elegans
Exon212271   121   V: 16512583-16512703 Caenorhabditis elegans
Exon212273   1630   V: 16512854-16514483 Caenorhabditis elegans
Exon212275   97   V: 16514994-16515090 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36D3.5.2 16510362 16515090 -1

1 Sequence

Length
3693

1 Sequence Ontology Term

Identifier Name Description
transcript