WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36D3.5.1 Sequence Name  F36D3.5.1
Length (nt)  3798   Chromosome Location  V: 16510362-16515240
Chromosome . Primary Identifier  V Chromosome Location . Start  16510362
Chromosome Location . End  16515240 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36D3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009471 F36D3.5 F36D3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36D3.5 F36D3.5 3648   V: 16510377-16510520

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36D3.5.1 16510362 16515240 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212255   159   V: 16510362-16510520 Caenorhabditis elegans
Exon212256   140   V: 16510570-16510709 Caenorhabditis elegans
Exon212258   316   V: 16510760-16511075 Caenorhabditis elegans
Exon212260   101   V: 16511125-16511225 Caenorhabditis elegans
Exon212262   225   V: 16511272-16511496 Caenorhabditis elegans
Exon212264   115   V: 16511542-16511656 Caenorhabditis elegans
Exon212266   377   V: 16511704-16512080 Caenorhabditis elegans
Exon212268   412   V: 16512127-16512538 Caenorhabditis elegans
Exon212270   121   V: 16512583-16512703 Caenorhabditis elegans
Exon212272   1630   V: 16512854-16514483 Caenorhabditis elegans
Exon212274   96   V: 16514994-16515089 Caenorhabditis elegans
Exon212276   106   V: 16515135-16515240 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36D3.5.1 16510362 16515240 -1

1 Sequence

Length
3798

1 Sequence Ontology Term

Identifier Name Description
transcript