WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y32B12B.4a.1 Sequence Name  Y32B12B.4a.1
Length (nt)  4775   Chromosome Location  V: 16553327-16563504
Chromosome . Primary Identifier  V Chromosome Location . Start  16553327
Chromosome Location . End  16563504 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y32B12B.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012524 Y32B12B.4 Y32B12B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y32B12B.4a Y32B12B.4a 4587   V: 16553335-16553480

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y32B12B.4a.1 16553327 16563504 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212346   154   V: 16553327-16553480 Caenorhabditis elegans
Exon212347   786   V: 16553530-16554315 Caenorhabditis elegans
Exon212348   903   V: 16555107-16556009 Caenorhabditis elegans
Exon212349   750   V: 16556061-16556810 Caenorhabditis elegans
Exon212350   711   V: 16558402-16559112 Caenorhabditis elegans
Exon212351   424   V: 16560056-16560479 Caenorhabditis elegans
Exon212353   440   V: 16561066-16561505 Caenorhabditis elegans
Exon212356   423   V: 16562370-16562792 Caenorhabditis elegans
Exon212361   184   V: 16563321-16563504 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y32B12B.4a.1 16553327 16563504 1

1 Sequence

Length
4775

1 Sequence Ontology Term

Identifier Name Description
transcript