WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03E6.1.1 Sequence Name  T03E6.1.1
Length (nt)  1005   Chromosome Location  V: 16576200-16578126
Chromosome . Primary Identifier  V Chromosome Location . Start  16576200
Chromosome Location . End  16578126 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03E6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006198 str-151 T03E6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03E6.1 T03E6.1 1005   V: 16576200-16576382

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03E6.1.1 16576200 16578126 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212379   183   V: 16576200-16576382 Caenorhabditis elegans
Exon212380   85   V: 16576462-16576546 Caenorhabditis elegans
Exon212381   79   V: 16577155-16577233 Caenorhabditis elegans
Exon212382   135   V: 16577283-16577417 Caenorhabditis elegans
Exon212383   142   V: 16577461-16577602 Caenorhabditis elegans
Exon212384   129   V: 16577656-16577784 Caenorhabditis elegans
Exon212385   178   V: 16577830-16578007 Caenorhabditis elegans
Exon212386   74   V: 16578053-16578126 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03E6.1.1 16576200 16578126 1

1 Sequence

Length
1005

1 Sequence Ontology Term

Identifier Name Description
transcript