WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03E6.5.1 Sequence Name  T03E6.5.1
Length (nt)  882   Chromosome Location  V: 16590156-16592042
Chromosome . Primary Identifier  V Chromosome Location . Start  16590156
Chromosome Location . End  16592042 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03E6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005475 srh-269 T03E6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03E6.5 T03E6.5 882   V: 16590156-16590182

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03E6.5.1 16590156 16592042 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212414   27   V: 16590156-16590182 Caenorhabditis elegans
Exon212415   147   V: 16590227-16590373 Caenorhabditis elegans
Exon212416   228   V: 16590422-16590649 Caenorhabditis elegans
Exon212417   185   V: 16591514-16591698 Caenorhabditis elegans
Exon212418   295   V: 16591748-16592042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03E6.5.1 16590156 16592042 -1

1 Sequence

Length
882

1 Sequence Ontology Term

Identifier Name Description
transcript