WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03E6.9.1 Sequence Name  T03E6.9.1
Length (nt)  1273   Chromosome Location  V: 16598889-16600723
Chromosome . Primary Identifier  V Chromosome Location . Start  16598889
Chromosome Location . End  16600723 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03E6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045356 T03E6.9 T03E6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03E6.9 T03E6.9 1017   V: 16598989-16599158

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03E6.9.1 16598889 16600723 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212481   270   V: 16598889-16599158 Caenorhabditis elegans
Exon212482   79   V: 16599209-16599287 Caenorhabditis elegans
Exon212483   437   V: 16599449-16599885 Caenorhabditis elegans
Exon212484   146   V: 16600195-16600340 Caenorhabditis elegans
Exon212485   341   V: 16600383-16600723 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03E6.9.1 16598889 16600723 -1

1 Sequence

Length
1273

1 Sequence Ontology Term

Identifier Name Description
transcript