WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06G6.1.1 Sequence Name  W06G6.1.1
Length (nt)  2266   Chromosome Location  V: 16623857-16627970
Chromosome . Primary Identifier  V Chromosome Location . Start  16623857
Chromosome Location . End  16627970 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06G6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012308 oac-53 W06G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06G6.1 W06G6.1 2115   V: 16624008-16624185

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06G6.1.1 16623857 16627970 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212476   329   V: 16623857-16624185 Caenorhabditis elegans
Exon212477   86   V: 16624232-16624317 Caenorhabditis elegans
Exon212478   146   V: 16624895-16625040 Caenorhabditis elegans
Exon212479   314   V: 16625090-16625403 Caenorhabditis elegans
Exon212480   100   V: 16625670-16625769 Caenorhabditis elegans
Exon212481   186   V: 16625823-16626008 Caenorhabditis elegans
Exon212482   157   V: 16626057-16626213 Caenorhabditis elegans
Exon212483   391   V: 16626259-16626649 Caenorhabditis elegans
Exon212484   316   V: 16626999-16627314 Caenorhabditis elegans
Exon212485   181   V: 16627425-16627605 Caenorhabditis elegans
Exon212486   60   V: 16627911-16627970 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06G6.1.1 16623857 16627970 -1

1 Sequence

Length
2266

1 Sequence Ontology Term

Identifier Name Description
transcript