WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014546 Gene Name  W06G6.t1
Sequence Name  ? W06G6.t1 Organism  Caenorhabditis elegans
Biotype  SO:0001272 Genetic Position  :±
Length (nt)  ? 72
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SummaryGenomicsOther
 
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014546

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W06G6.t1 W06G6.t1 72   V: 16640578-16640649
 

Other

0 CDSs

1 RNAi Result

WormBase ID
WBRNAi00019669

17 Allele

Public Name
gk963271
WBVar02123303
WBVar02124908
gk964050
WBVar02123708
WBVar02124497
WBVar02124626
WBVar02124059
WBVar02121634
WBVar02124267
WBVar02122684
WBVar02121793
WBVar02123140
WBVar02124428
gk963807
gk963683
gk337782

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00014546 16640578 16640649 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts depleted in purified oocyte P bodies comparing to in whole oocytes. DESeq2, FDR < 0.05, fold change > 2. WBPaper00065975:P-body_vs_oocyte_depleted

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00014546 16640578 16640649 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
72

1 Sequence Ontology Term